DecodeME Project Bioinformatics

Brain Regions Clustering Hub

Explore tissue-specific gene expression clustering, biological descriptions, STRING networks, and functional enrichment analyses for brain tissue datasets.

Datasets Analyzed

3 Profiles

Cluster Runs

9 Total

Interactive Reports

3 HTML Reports

Heatmaps & Plots

100+ Visuals

Primary Biological Report

Interactive Biological Report generated for the full Brain TSV tissue expression analysis. Contains detailed cluster tissues, enrichment metrics, and interactive tables.

Open Biological Report (HTML)
Analytical Reports

View formatted analysis reports containing functional annotations, biological descriptions, and STRING networks.

Biological Descriptions
Tissue expression & top annotations
Combined Enrichment Report
Detailed Enrichr terms across clusters
STRING Network Report
PPI network connectivity & enrichment
Data Files & CSV Tables

Access tabular data, including expression matrices, silhouette scores, and cluster mappings.

expression_matrix_median_log2_zscore.csv
clustering_metrics_median_log2_zscore.csv
enrichr_terms.csv
enrichr_k_summary.csv
string_k_summary.csv
string_terms.csv
gene_clusters_k15_median_log2_zscore.csv
gene_silhouette_scores_k15_median_log2_zscore.csv
run_expression_matrix_region.csv (Raw)
Dataset Visualizations
Interactive Cluster Explorer

Select clustering size and cluster index to load biological heatmaps and gene profiles.

Cluster Count (k)
Select Cluster
Cluster Heatmap
Loading Cluster...
Mapped Genes
Fetching gene details...
Primary Biological Report

Interactive Biological Report generated for the Brain TSV Supercluster analysis. Contains detailed cluster tissues, enrichment metrics, and interactive tables.

Open Biological Report (HTML)
Analytical Reports

View formatted analysis reports containing functional annotations, biological descriptions, and STRING networks.

Biological Descriptions
Tissue expression & top annotations
Combined Enrichment Report
Detailed Enrichr terms across clusters
STRING Network Report
PPI network connectivity & enrichment
Data Files & CSV Tables

Access tabular data, including expression matrices, silhouette scores, and cluster mappings.

expression_matrix_median_log2_zscore.csv
clustering_metrics_median_log2_zscore.csv
enrichr_terms.csv
enrichr_k_summary.csv
string_k_summary.csv
string_terms.csv
gene_clusters_k8_median_log2_zscore.csv
gene_silhouette_scores_k8_median_log2_zscore.csv
run_expression_matrix.csv (Raw)
Dataset Visualizations
Interactive Cluster Explorer

Select clustering size and cluster index to load biological heatmaps and gene profiles.

Cluster Count (k)
Select Cluster
Cluster Heatmap
Loading Cluster...
Mapped Genes
Fetching gene details...
Primary Biological Report

Interactive Biological Report generated for the FUMA Supercluster mapped genes analysis. Contains detailed cluster tissues, enrichment metrics, and interactive tables.

Open Biological Report (HTML)
Analytical Reports

View formatted analysis reports containing functional annotations, biological descriptions, and STRING networks.

Biological Descriptions
Tissue expression & top annotations
Combined Enrichment Report
Detailed Enrichr terms across clusters
STRING Network Report
PPI network connectivity & enrichment
Data Files & CSV Tables

Access tabular data, including expression matrices, silhouette scores, and cluster mappings.

expression_matrix_median_log2_zscore.csv
clustering_metrics_median_log2_zscore.csv
enrichr_terms.csv
enrichr_k_summary.csv
string_k_summary.csv
string_terms.csv
gene_clusters_k11_median_log2_zscore.csv
gene_silhouette_scores_k11_median_log2_zscore.csv
run_expression_matrix.csv (Raw)
Dataset Visualizations
Interactive Cluster Explorer

Select clustering size and cluster index to load biological heatmaps and gene profiles.

Cluster Count (k)
Select Cluster
Cluster Heatmap
Loading Cluster...
Mapped Genes
Fetching gene details...
Document Viewer
Loading document content...